OK... if you are going to do it anyway... why ask?
It will make a difference, but not enough to cover the price tag of the parts.
Also... one thing to remember... your engine's top speed is set with a rev limiter, so with twin carbs... all you may accomplish is bouncing off of it more.
Finally... twin carbs on a little SeaDoo engine will effect the bottom acceleration. From a stand still, you will get a huge vacuum drop if you open the throttle quickly, and in turn, creating a low RPM stumble that is hard to tune out. Because of that... I would recommend raising your compression a little to help. But, if it's an old engine... it may be hard on the crank bearings.
As far as the "It looks cool" comment... I don't know about you... but I ride my skis with the seats on, and the engines hidden.
OK... I'm not trying to be a jack-off... but if more than one person has told you that it's not a big improvement... then you should listen. The money would be better spent on a good impeller, a high compression head, or a tuned pipe.
BUT... if you do the swap... please post up some pics, and ask questions... we will be here to help you get it tuned again. :cheers: